AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Achnanthidium minutissimum (Kütz.) Czarn.
	in Proc. Int. Diatom Symp. 11: p. 157. 1994.
	[AMIN2] sec. F. Rimet & B. Beszteri - AWI Institute 2004.

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	Culture Strain No: AMIN2
	Locus: AJ866992, 1529 bp, DNA linear, PLN 01-FEB-2005
	Definition: Achnanthes minutissima partial 18S rRNA gene, clone AMIN2.
	Accession: AJ866992
	Version: AJ866992.1 GI:58416140
	Keywords: 18S rRNA
	Source: Achnanthidium minutissimum
	Organism: Achnanthidium minutissimum; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Achnanthales; Achnanthidium.
Reference:
	(bases 1 to 1529) Submitted (24-NOV-2004) Rimet F., Crebs, Centre de Recherche Public - Lippmann, 162a, avenue de la Faiencerie, L-1511 Luxembourg, LUXEMBOURG
Features:
	FEATURES
	Sequence Length: 1529
	Base Count:

Origin:
	001 tagtatttat tagattgaaa ccaacccctt cggggtgatg tggtgattca taataagctt 061 gcggatcgca ttcgtgcgat ggatcattca agtttctgcc ctatcagctt tggatggtag 121 ggtattggcc taccatggct ttaacgggta acggaggatt agggtttgat tccggagagg 181 gagcctgaga gacggctacc acatccatgg aaggcagcag gcgcgtaaat tacccaatcc 241 tgacacaggg aggtagtgac aataaataac aatgccgggc ctttttaggt ctggcaattg 301 gaatgagaac aatttaaacc ccttatcgag gatcaattgg agggcaagtc tggtgccagc 361 agccgcggta attccagctc caatagcgta tattaaagtt gttgcagtta aaaagctcgt 421 agttggattt gtggtgacag ttgtggtcca tttttggtac taacgattgt tgccatcctt 481 gggtggaacc tgtgtggcat taacttgtcg tgcaggggat gcccatcgtt tactgtgaaa 541 aaatcagcgc gttcaaagca ggcttatgcc gttgaatgtc ttagcatgga ataataagat 601 aggaccttgg tgctattttg ttggtttgcg taccgaggta atgattaata gggacagttg 661 ggggtattcg tattccattg tcagaggtga aattcttgga tttctggaag acgaactact 721 gcgaaagcat ttaccaagga tgttttcatt aatcaagaac gaaagttagg ggatcgaaga 781 tgattagata ccatcgtagt cttaaccata aactatgccg acaagggatt ggtggggttt 841 cgttacgtct ccatcagcac cttatgagaa atcacaagtt tttgggttcc ggggggagta 901 tggtcgcaag gctgaaactt aaagaaattg acggaagggc accaccagga gtggagcctg 961 cggcttaatt tgactcaaca cgggaaaact taccaggtcc agacatagtg aggattgaca 1021 gattgagagc tctttctgat tctatgggtg gtggtgcatg gccgttctta gttggtggag 1081 tgatttgtct ggttaattcc gttaacgaac gagaccgctg cctgctaaat agtccagtga 1141 gtgaatttca ctgacgagga cttcttagag ggacgtgcgt tctattagac gcaggaagat 1201 agcggcaata acaggtctgt gatgccctta gatgttctgg gccgcacgcg cgctacactg 1261 atgcattcaa cgagtcttcc ttggccgaga ggcctgggca atcttcgaac gtgcatcgtg 1321 atagggatag attattgcaa ttattaatct tgaacgagga attcctagta aacgcagatc 1381 atcaatctgc attgattacg tccctgccct ttgtacacac cgcccgtcgc acctaccgat 1441 tgaatggtcc ggtgaagcct cgggattgcg atgaatgcct ttattggtgt tggttgcgag 1501 aacttgtcta aaccttatca tttagagga


Plain Sequence:
TAGTATTTATTAGATTGAAACCAACCCCTTCGGGGTGATGTGGTGATTCATAATAAGCTTGCGGATCGCATTCGTGCGATGGATCATTCAAGTTTCTGCCCTATCAGCTTTGGATGGTAGGGTATTGGCCTACCATGGCTTTAACGGGTAACGGAGGATTAGGGTTTGATTCCGGAGAGGGAGCCTGAGAGACGGCTACCACATCCATGGAAGGCAGCAGGCGCGTAAATTACCCAATCCTGACACAGGGAGGTAGTGACAATAAATAACAATGCCGGGCCTTTTTAGGTCTGGCAATTGGAATGAGAACAATTTAAACCCCTTATCGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGTGACAGTTGTGGTCCATTTTTGGTACTAACGATTGTTGCCATCCTTGGGTGGAACCTGTGTGGCATTAACTTGTCGTGCAGGGGATGCCCATCGTTTACTGTGAAAAAATCAGCGCGTTCAAAGCAGGCTTATGCCGTTGAATGTCTTAGCATGGAATAATAAGATAGGACCTTGGTGCTATTTTGTTGGTTTGCGTACCGAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTCTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCAAGAACGAAAGTTAGGGGATCGAAGATGATTAGATACCATCGTAGTCTTAACCATAAACTATGCCGACAAGGGATTGGTGGGGTTTCGTTACGTCTCCATCAGCACCTTATGAGAAATCACAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGAAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAAACTTACCAGGTCCAGACATAGTGAGGATTGACAGATTGAGAGCTCTTTCTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGTGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCGCTGCCTGCTAAATAGTCCAGTGAGTGAATTTCACTGACGAGGACTTCTTAGAGGGACGTGCGTTCTATTAGACGCAGGAAGATAGCGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTCTTCCTTGGCCGAGAGGCCTGGGCAATCTTCGAACGTGCATCGTGATAGGGATAGATTATTGCAATTATTAATCTTGAACGAGGAATTCCTAGTAAACGCAGATCATCAATCTGCATTGATTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCACCTACCGATTGAATGGTCCGGTGAAGCCTCGGGATTGCGATGAATGCCTTTATTGGTGTTGGTTGCGAGAACTTGTCTAAACCTTATCATTTAGAGGA
	Rimet,F., Beszteri,B., Berzano,M., Masquelier,S., Nicot,N. & Ector,L.: Phylogeny of Nitzschia based on 18S rDNA sequences(Unpublished).
	http://www.ncbi.nlm.nih.gov/nuccore/58416140

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