AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Encyonema silesiacum (Bleisch) D.G.Mann
	in Round & al., Diatoms, p. 667. 1990.
	[D16_038] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.

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	Culture Strain No: D16_038
	Locus: FR873243, 376 bp DNA linear, PLN 09-AUG-2011
	Definition: Encyonema silesacum partial 18S rRNA gene, specimen voucher B 40 0040691, strain D16_038.
	Accession: FR873243
	Version: FR873243.1 GI:343178532
	Keywords: 18S rRNA
	Source: Encyonema silesacum
	Organism: Encyonema silesacum; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Cymbellales; Cymbellaceae; Encyonema.
Reference:
	(bases 1 to 376) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 376
	Base Count:

Origin:
	001 ttccagctcc aatagcgtat attaaagttg ttgcagttaa aaagctcgta gttggatttg 061 tggtggattg tcgagtcctc ttttggtact tgtacgatct gccatccttg ggtggaacct 121 gtgtggcatt aggttgtcgt gcaggggatg ctcatcattt actgtgaaaa aatcagcgcg 181 ttcaaagcag gcttatgccg ttgaatgtat tagcatggaa taataagata ggaccttggt 241 actattttgt tggtttgtgc accgaggtaa tgattaatag ggacagttgg gggtattcgt 301 attccattgt cagaggtgaa attcttggat ttctggaaga cgaactactg cgaaagcatt 361 taccaaggat gttttc


Plain Sequence:
TTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGTGGATTGTCGAGTCCTCTTTTGGTACTTGTACGATCTGCCATCCTTGGGTGGAACCTGTGTGGCATTAGGTTGTCGTGCAGGGGATGCTCATCATTTACTGTGAAAAAATCAGCGCGTTCAAAGCAGGCTTATGCCGTTGAATGTATTAGCATGGAATAATAAGATAGGACCTTGGTACTATTTTGTTGGTTTGTGCACCGAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTCTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873243

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