AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Fragilaria mesolepta Rabenh.
	Alg. Eur. vol. 5/6, No. 1041 (2 fig.). 1861.
	[D03_041] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.

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	Culture Strain No: D03_041
	Locus: FR873245, 385 bp DNA linear, PLN 09-AUG-2011
	Definition: Fragilaria capucina var. mesolepta partial 18S rRNA gene, specimen voucher B 40 0040693, strain D03_041.
	Accession: FR873245
	Version: FR873245.1 GI:343178534
	Keywords: 18S rRNA
	Source: Fragilaria capucina var. mesolepta
	Organism: Fragilaria capucina var. mesolepta; Eukaryota; stramenopiles; Bacillariophyta; Fragilariophyceae; Fragilariophycidae; Fragilariales; Fragilariaceae; Fragilaria.
Reference:
	(bases 1 to 385) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 385
	Base Count:

Origin:
	001 attccagctc caatagcgta tattaaagtt gttgcagtta aaaagctcgt agttggattt 061 gtggatgggc cgacgggtgt tctcttttga gcataacctg tttagctcgt ccatccttgg 121 gtggaatttg tgtggcatta ggttgtcgtg caggggatgc ccatctttta ctgtgaaaaa 181 attagagtgt tcaaagcagg cttatgccgt tgaatatatt agcctggaat aatgagatag 241 gaccttggtt ctattttgtt ggtttgcgca ccgaggtaat gattaatagg gacagttggg 301 ggtattcgta ttccattgtc agaggtgaaa ttcttggatt tttggaagac gaactactgc 361 gaaagcattt accaaggatg ttttc


Plain Sequence:
ATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGATGGGCCGACGGGTGTTCTCTTTTGAGCATAACCTGTTTAGCTCGTCCATCCTTGGGTGGAATTTGTGTGGCATTAGGTTGTCGTGCAGGGGATGCCCATCTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATATATTAGCCTGGAATAATGAGATAGGACCTTGGTTCTATTTTGTTGGTTTGCGCACCGAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTTTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873245

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