AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Gomphonema parvulum Kütz.
	Sp. Alg., p. 65. 1849.
	[D33_006] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.

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	Culture Strain No: D33_006
	Locus: FR873246, 377 bp DNA linear, PLN 09-AUG-2011
	Definition: Gomphonema parvulum partial 18S rRNA gene, specimen voucher B 40 0040694, strain D33_006.
	Accession: FR873246
	Version: FR873246.1 GI:343178535
	Keywords: 18S rRNA
	Source: Gomphonema parvulum
	Organism: Gomphonema parvulum; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Cymbellales; Gomphonemataceae; Gomphonema.
Reference:
	(bases 1 to 377) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 377
	Base Count:

Origin:
	001 attccagctc caatagcgta tattaaagtt gttgcagtta aaaagctcgt agttggattt 061 gtggcagtgc tcgagtgcct tttttggacg ctctgagcac agccatcctt gggaggaatt 121 cgtgtggcat taggttgttg catgggggat actcaacatt tactgtgaaa aaatcagcgc 181 gttcaaagca agcttatgct cttgaatgta ttagcatgga ataataagat aggactttag 241 tactattttg ttggtttgcg tattaaggta atgattaata gggatagttg ggggtattcg 301 tattccattg tcagaggtga aattcttgga tttttggaag acgaactact gcgaaagcat 361 ttaccaagga tgttttc


Plain Sequence:
ATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGCAGTGCTCGAGTGCCTTTTTTGGACGCTCTGAGCACAGCCATCCTTGGGAGGAATTCGTGTGGCATTAGGTTGTTGCATGGGGGATACTCAACATTTACTGTGAAAAAATCAGCGCGTTCAAAGCAAGCTTATGCTCTTGAATGTATTAGCATGGAATAATAAGATAGGACTTTAGTACTATTTTGTTGGTTTGCGTATTAAGGTAATGATTAATAGGGATAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTTTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873246

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