Molecular Phylogeny of Micro Algae in the AlgaTerra Database
AlgaTerra    Information System on terrestrial and limnic Micro Algae
 
HOME
PICTURES
NAMES
TYPES
MORPHOLOGY
MOLECULAR
ECOLOGY
BIBLIOGRAPHY
TEAM
DNA Data in AlgaTerra
  Hantzschia amphioxys (Ehrenb.) Grunow
  in Monthly Microscop. J. 18: p. 174. 1877.
  [D28_006] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.
   
------------
  Culture Strain No: D28_006
  Locus: FR873247, 402 bp DNA linear, PLN 09-AUG-2011
  Definition: Hantzschia amphioxys partial 18S rRNA gene, specimen voucher B 40 0040695, strain D28_006.
  Accession: FR873247
  Version: FR873247.1 GI:343178536
  Keywords: 18S rRNA
  Source: Hantzschia amphioxys
  Organism: Hantzschia amphioxys; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Hantzschia.
Reference:
  (bases 1 to 402) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
  FEATURES
  Sequence Length: 402
  Base Count: 
 
Origin:
  001 tatattaaag ttgttgcagt taaaaagctc gtagttggat ttgtggctgt cgcgagcggc
061 ctgacactta tgtgttagtg cctgcctgcg acgccatcct tgggtggaac ctgtgtggca
121 ttaggttgtc gtgcagggga tgcccatcgt ttactgtgag aaaattagag tgttcaaagc
181 aggcttatgc cgttgaatat gttagcatgg aataataaga taggaccttg gtactatttt
241 gttggtttgc gcaccaaggt aatggttaat agggacagtc gggggtattc gtattccatt
301 gtcagaggtg aaattcttgg atttttggaa gacgaactac tgcgaaagca tttaccaagg
361 atgtttacat taatcaagaa cgaaagttag gggatcgaaa at
 
 
Plain Sequence:
  Proposed Barcode
  Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
  http://www.ncbi.nlm.nih.gov/nuccore/FR873247
   

AlgaTerra is maintained by the Botanic Garden and Botanical Museum Berlin-Dahlem, FU Berlin, Germany.
Please contact us for any problem. Disclaimer
.