AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Melosira varians C. Agardh
	in Flora 10: p. 628. 1827.
	[D34_009] sec. AlgaTerra - AlgaTerra Information System [online]. Botanic Garden and Botanical Museum Berlin-Dahlem, FU-Berlin 2005+.

------------
	Culture Strain No: D34_009
	Locus: FR873250, 379 bp, DNA, linear, PLN 09-AUG-2011
	Definition: Melosira varians partial 18S rRNA gene, specimen voucher B 40 0040698, strain D34_009.
	Accession: FR873250
	Version: FR873250.1 GI:343178539
	Keywords: 18S rRNA
	Source: Melosira varians
	Organism: Melosira varians; Eukaryota; stramenopiles; Bacillariophyta; Coscinodiscophyceae; Coscinodiscophycidae; Melosirales; Melosiraceae; Melosira.
Reference:
	(bases 1 to 379) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 379
	Base Count:

Origin:
	001 attccagctc caatagcgta tattaaagtt gttgcagtta aaaagctcgt agttgaattt 061 taggttgtgt ggcttattct cacattgtga gaaagagtcg tttagccttt aatgattaat 121 gataaaatag cattaatttg ttgttttgtt aggaatcatc ttttactgtg aagaaattag 181 agtgttcaaa gcaggcattg ctgtgaatac attagcatgg aataatgaaa taggactcag 241 gttctatttt gttggtttaa gacccatgag taatgattaa caggaacagt tgggggtatt 301 tgtattccag tgtcagaggt gaaattcttg gatttctgga agacaaacta ctgcgaaagc 361 atttaccaag gatgttttc


Plain Sequence:
ATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAATTTTAGGTTGTGTGGCTTATTCTCACATTGTGAGAAAGAGTCGTTTAGCCTTTAATGATTAATGATAAAATAGCATTAATTTGTTGTTTTGTTAGGAATCATCTTTTACTGTGAAGAAATTAGAGTGTTCAAAGCAGGCATTGCTGTGAATACATTAGCATGGAATAATGAAATAGGACTCAGGTTCTATTTTGTTGGTTTAAGACCCATGAGTAATGATTAACAGGAACAGTTGGGGGTATTTGTATTCCAGTGTCAGAGGTGAAATTCTTGGATTTCTGGAAGACAAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873250

AlgaTerra is maintained by the Botanic Garden and Botanical Museum Berlin-Dahlem, FU Berlin, Germany.
Please contact us for any problem. Disclaimer.