AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Navicula gregaria Donkin
	in Quart. J. Microscop. Sci. ser. 2, 1: p. 10, pl. 1: fig. 9. 1861.
	[D08_002] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.

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	Culture Strain No: D08_002
	Locus: FR873252, 385 bp, DNA, linear, PLN 09-AUG-2011
	Definition: Navicula gregaria partial 18S rRNA gene, specimen voucher B 40 0040703, strain D08_002.
	Accession: FR873252
	Version: FR873252.1 GI:343178541
	Keywords: 18S rRNA
	Source: Navicula gregaria
	Organism: Navicula gregaria; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Naviculaceae; Navicula.
Reference:
	(bases 1 to 385) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 385
	Base Count:

Origin:
	001 attccagctc caatagcgta tattaaagtt gttgcagtta aaaagctcgt agttggattt 061 gtggcgtacg acgggctccg ggcacttgtt gtctgagtag cttgtcgttg ccatccttgg 121 gtggaatctg tgtggcatta ggttgtcgtg caggggatgc ccatctttta ctgtgaaaaa 181 attagagtgt tcaaagcagg cttatgccgt tgaatatatt agcatggaat aataagatag 241 gactttgtcg ctattttgtt ggtttgcgcg ataaggtaat gattaatagg gacagttggg 301 ggtattcgta ttccattgtc agaggtgaaa ttcttggatt tctggaagac gaactactgc 361 gaaagcattt accaaggatg ttttc


Plain Sequence:
ATTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGCGTACGACGGGCTCCGGGCACTTGTTGTCTGAGTAGCTTGTCGTTGCCATCCTTGGGTGGAATCTGTGTGGCATTAGGTTGTCGTGCAGGGGATGCCCATCTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATATATTAGCATGGAATAATAAGATAGGACTTTGTCGCTATTTTGTTGGTTTGCGCGATAAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTCTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873252

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