AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Nitzschia cf.fonticola "strain D15_023"
	[D15_023] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.

------------
	Culture Strain No: D15_023
	Locus: FR873257, 372 bp, DNA, linear, PLN 09-AUG-2011
	Definition: Nitzschia cf. fonticola D15_023 partial 18S rRNA gene, specimen voucher B40 0040712, strain D15_023.
	Accession: FR873257
	Version: FR873257.1 GI:343178546
	Keywords: 18S rRNA
	Source: Nitzschia cf. fonticola D15_023
	Organism: Nitzschia cf. fonticola D15_023; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Nitzschia.
Reference:
	(bases 1 to 372) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 372
	Base Count:

Origin:
	001 atagcgtata ttaaagttgt tgcagttaaa aagctcgtag ttggatttgt ggctggtcac 061 agtggcgtgc cctactgggt tatgctgttt gtgtctgcca tctttgggtg gaatctaggt 121 ggcattaggt tgtcgtctgg gggatgccca tcgtttactg tgaaaaaatt agagtgttca 181 aagcaggctt atgccgttga atatgttagc atggaataat gatataggac cttggtacta 241 ttttgttggt ttgcgcactg aggtaatgat taatagggac agttgggggt attcgtattc 301 cattgtcaga ggtgaaattc ttggattttt ggaagacgaa ctactgcgaa agcatttacc 361 aaggatgttt tc


Plain Sequence:
ATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTGTGGCTGGTCACAGTGGCGTGCCCTACTGGGTTATGCTGTTTGTGTCTGCCATCTTTGGGTGGAATCTAGGTGGCATTAGGTTGTCGTCTGGGGGATGCCCATCGTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATATGTTAGCATGGAATAATGATATAGGACCTTGGTACTATTTTGTTGGTTTGCGCACTGAGGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTTTGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873257

AlgaTerra is maintained by the Botanic Garden and Botanical Museum Berlin-Dahlem, FU Berlin, Germany.
Please contact us for any problem. Disclaimer.