Molecular Phylogeny of Micro Algae in the AlgaTerra Database
AlgaTerra    Information System on terrestrial and limnic Micro Algae
 
HOME
PICTURES
NAMES
TYPES
MORPHOLOGY
MOLECULAR
ECOLOGY
BIBLIOGRAPHY
TEAM
DNA Data in AlgaTerra
  Nitzschia sigmoidea (Nitzsch) W. Sm.
  Syn. Brit. Diat. 1, p. 38. 1853.
  [Nitz1] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.
   
------------
  Culture Strain No: Nitz1
  Locus: FR873262, 373 bp, DNA, linear, PLN 09-AUG-2011
  Definition: Nitzschia sigmoidea partial 18S rRNA gene, specimen voucher B 40 0040713, strain Nitz1.
  Accession: FR873262
  Version: FR873262.1 GI:343178551
  Keywords: 18S rRNA
  Source: Nitzschia sigmoidea
  Organism: Nitzschia sigmoidea; Eukaryota; stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae; Nitzschia.
Reference:
  (bases 1 to 373) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
  FEATURES
  Sequence Length: 373
  Base Count: 
 
Origin:
  001 atagcgtata ttaaagttgt tgcagttaaa aagctcgtag ttggatttgt ggctgtcgtg
061 cgcttttctt ctcaatgagt tgatgtagtg tcgcgtcgcc atcctggggt ggatcctgtg
121 tggcattagg tcgtcgtgca ggggatgccc atcgtttact gtgaaaaaat tagagtgttc
181 aaagcaggct tatgccgttg aatatattaa catggaataa taagatagga cctgggtact
241 attttgttgg tttgcgcacc aaggtaatga ttaatagggt cagttggggg tattcgtatt
301 ccattgtcag aggtgaaatt cttggatttt tggacacgaa cgtactgcga aagcatttac
361 caaggatttt gtc
 
 
Plain Sequence:
  Proposed Barcode
  Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
  http://www.ncbi.nlm.nih.gov/nuccore/FR873262
   

AlgaTerra is maintained by the Botanic Garden and Botanical Museum Berlin-Dahlem, FU Berlin, Germany.
Please contact us for any problem. Disclaimer
.