AlgaTerra Information System on Micro Algae - Molecular Data and Phylogeny

Molecular Phylogeny of Micro Algae in the AlgaTerra Database

AlgaTerra Information System on terrestrial and limnic Micro Algae

DNA Data in AlgaTerra

	Stephanodiscus minutulus (Kütz.) Cleve & Möller
	Diatoms, collection of 324 slides, Slide 300 nomen non planta. 1882.
	[D03_012] sec. Zimmermann, J., Jahn, R. & Gemeinholzer, B. - Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols 2011.

------------
	Culture Strain No: D03_012
	Locus: FR873265, 375 bp, DNA, linear, PLN 09-AUG-2011
	Definition: Stephanodiscus minutulus partial 18S rRNA gene, specimen voucher B 40 0040716, strain D03_012.
	Accession: FR873265
	Version: FR873265.1 GI:343178554
	Keywords: 18S rRNA
	Source: Stephanodiscus minutulus
	Organism: Stephanodiscus minutulus; Eukaryota; stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Stephanodiscus.
Reference:
	(bases 1 to 375) Zimmermann, J. (Direct Submission): Submitted (07-JUN-2011) to the INSDC. Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universitaet Berlin, Koenigin-Luise-Str. 6-8, 14195 Berlin, GERMANY
Features:
	FEATURES
	Sequence Length: 375
	Base Count:

Origin:
	001 atagcgtata ttaaagttgt tgcagttaaa aagctcgtag ttggatttct ggcaggagcg 061 accggtcgcg cactctgtgc gtgaacttgg ctgtctctgg ccatccttgg ggagatcctg 121 tttggcatta agttgtcggg caggggatac ccatcgttta ctgtgaaaaa attagagtgt 181 ttaaagcagg cttatgccgt tgaatatatt agcatggaat aataagatag gacttcggaa 241 ctattttgtt ggtttgcgtt acgaagtaat gattaatagg gacagttggg ggtattcgta 301 ttccgttgtc agaggtgaaa ttcttggatt tccggaagac gaactactgc gaaagcattt 361 accaaggatg ttttc


Plain Sequence:
ATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGATTTCTGGCAGGAGCGACCGGTCGCGCACTCTGTGCGTGAACTTGGCTGTCTCTGGCCATCCTTGGGGAGATCCTGTTTGGCATTAAGTTGTCGGGCAGGGGATACCCATCGTTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCTTATGCCGTTGAATATATTAGCATGGAATAATAAGATAGGACTTCGGAACTATTTTGTTGGTTTGCGTTACGAAGTAATGATTAATAGGGACAGTTGGGGGTATTCGTATTCCGTTGTCAGAGGTGAAATTCTTGGATTTCCGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTC
	Proposed Barcode
	Zimmermann, J., Jahn, R. & Gemeinholzer, B. 2011: Barcoding diatoms: evaluation of the V4 subregion on the 18S rRNA gene, including new primers and protocols. - Org. Divers. Evol. 11(3): 173-192.
	http://www.ncbi.nlm.nih.gov/nuccore/FR873265

AlgaTerra is maintained by the Botanic Garden and Botanical Museum Berlin-Dahlem, FU Berlin, Germany.
Please contact us for any problem. Disclaimer.